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The Complete Mitochondrial Genome of Idiocerus Koreanus Matsumura, 1915 (Hemiptera: Cicadellidae)

Chengyan Si, Bin Zhang

Abstract


The complete mitochondrial genome of Idiocerus koreanus Matsumura, 1915 (Hemiptera, Cicadellidae) was described, which was 15, 594 bp in length, encoding the standard set of 22 transfer RNAs (tRNAs), two ribosomal RNAs (rRNAs), 13 protein-coding genes (PCGs) and one A-T rich region (also called control region). The content of A+T was 76.4% (A: 44.3%, T: 32.1%, C: 13.9%, G: 9.6%), which was much higher than that of G+C. The complete mitochondrial genome of I. koreanus and the other 22 species were used for phylogenetic analysis using the Bayesian method. The phylogenetic tree visualized that I. koreanus and species from the same subfamily were clustered in one branch, which was closely related to Metidiocerus sp.. The identified mitochondrial genome of I. koreanus in Inner Mongolia China will provide fundamental data to explore the evolution of the mitochondrial genome in Idiocerinae.

Keywords


Idiocerus koreanus; Mitochondrial genome; Phylogenetic tree

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References


[1] Bankevich A, Nurk S, Antipov D, Gurevich AA, Dvorkin M, Kulikov AS, Lesin VM, Nikolenko SI, Pham S, Prjibelski AD, et al. 2012. SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing. J Comput Biol. 19(5): 455–477.

[2] Bernt M, Donath A, Jühling F, Externbrink F, Florentz C, Fritzsch G, Pütz J,Middendorf M, Stadler PF. 2013. MITOS: improved de novo metazoan mitochondrial genome annotation. Mol Phylogenet Evol. 69(2): 313–319.

[3] Chen XX, Yuan ZW, Yuan XW, Song YH. 2020. Progress in complete mitochondrial genome structure of leafhopper, Cicada. Genomics and applied biology. 39(06): 2565-2577.

[4] Matsumura, S. 1915. Neue Cicadinen Koreas. Transactions of the Sapporo Natural History Society, 5: 154–184.

[5] Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, H€ ohna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61(3): 539–542.

[6] Zhang B, Webb MD. 2019. A checklist and key to the Idiocerine leafhoppers (Hemiptera: Cicadellidae) of Hainan Island, with description of a new genus and new species. Zootaxa. 4576: 581-587.




DOI: http://dx.doi.org/10.18686/ahe.v7i16.8987

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